Stem-loop ocu-mir-411

Accession

MI0039400

Description

Oryctolagus cuniculus ocu-mir-411 precursor miRNA

Sequence

UAGUAGACCGUAUAGCGUACGcuuuaucugugacgUAUGUAACACGGUCCACUAAC
((((.((((((...((((((((.........).)))))))...)))))).))))..

Structure

--    A      AUA       - uuu 
  UAGU GACCGU   GCGUACG c   a
  |||| ||||||   ||||||| |   u
  AUCA CUGGCA   UGUAUgc g   c
CA    C      CAA       a ugu 

Annotation confidence Not enough data

Genome context

GL019048.1: 122887-122942 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ocu-mir-411

Mature ocu-miR-411-5p

• Accession: MIMAT0048437
• Description: Oryctolagus cuniculus ocu-miR-411-5p mature miRNA
• Sequence: 1 - UAGUAGACCGUAUAGCGUACG - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-411-3p

• Accession: MIMAT0048438
• Description: Oryctolagus cuniculus ocu-miR-411-3p mature miRNA
• Sequence: 36 - UAUGUAACACGGUCCACUAAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344