Stem-loop ocu-mir-424

Accession

MI0039403

Description

Oryctolagus cuniculus ocu-mir-424 precursor miRNA

Literature search

1 open access papers mention ocu-mir-424
(1 sentences)

Sequence

CAGCAGCAAUUCAUGUUUUGAAgugcuaugauucauuCAAAACGUGAGGCGCUGCUAUA
.((((((..(((((((((((((.............)))))))))))))..))))))...

Structure

--C      AA             gugcu 
   AGCAGC  UUCAUGUUUUGAA     a
   ||||||  |||||||||||||     u
   UCGUCG  GAGUGCAAAACuu     g
AUA      CG             acuua 

Annotation confidence Not enough data

Genome context

CM000811.1: 108856105-108856163 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from ocu-mir-424

Mature ocu-miR-424-5p

• Accession: MIMAT0048443
• Description: Oryctolagus cuniculus ocu-miR-424-5p mature miRNA
• Sequence: 1 - CAGCAGCAAUUCAUGUUUUGAA - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-424-3p

• Accession: MIMAT0048444
• Description: Oryctolagus cuniculus ocu-miR-424-3p mature miRNA
• Sequence: 38 - CAAAACGUGAGGCGCUGCUAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344