Stem-loop ocu-mir-432

Accession

MI0039405

Description

Oryctolagus cuniculus ocu-mir-432 precursor miRNA

Sequence

UCUUGGAGUAGGUCAUUGGGUGGauccucuaauuccuuacgugggccACUGGAUGGCUCCUCCAUGUCU
...(((((..(((((((.(((((.(((.((((....))).).)))))))).))))))).))))).....

Structure

--UCU     UA       G     a   u -   u 
     UGGAG  GGUCAUU GGUGG ucc c uaa u
     |||||  ||||||| ||||| ||| | |||  
     ACCUC  UCGGUAG UCAcc ggg g auu c
UCUGU     -C       G     -   u c   c 

Annotation confidence Not enough data

Genome context

GL019048.1: 9852-9920 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-432

Mature ocu-miR-432-5p

• Accession: MIMAT0048447
• Description: Oryctolagus cuniculus ocu-miR-432-5p mature miRNA
• Sequence: 1 - UCUUGGAGUAGGUCAUUGGGUGG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-432-3p

• Accession: MIMAT0048448
• Description: Oryctolagus cuniculus ocu-miR-432-3p mature miRNA
• Sequence: 48 - ACUGGAUGGCUCCUCCAUGUCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344