miRBase entry: ocu-mir-432

Stem-loop ocu-mir-432

Accession

MI0039405

Description

Oryctolagus cuniculus ocu-mir-432 precursor miRNA

Sequence

UCUUGGAGUAGGUCAUUGGGUGGauccucuaauuccuuacgugggccACUGGAUGGCUCCUCCAUGUCU
...(((((..(((((((.(((((.(((.((((....))).).)))))))).))))))).))))).....

Structure

--UCU     UA       G     a   u -   u 
     UGGAG  GGUCAUU GGUGG ucc c uaa u
     |||||  ||||||| ||||| ||| | |||  
     ACCUC  UCGGUAG UCAcc ggg g auu c
UCUGU     -C       G     -   u c   c

Annotation confidence Not enough data

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Genome context

GL019048.1: 9852-9920 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ocu-mir-432

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-432-5p

Accession	MIMAT0048447
Description	Oryctolagus cuniculus ocu-miR-432-5p mature miRNA
Sequence	1 - UCUUGGAGUAGGUCAUUGGGUGG - 23
Evidence	experimental Illumina [1]

Mature ocu-miR-432-3p

Accession	MIMAT0048448
Description	Oryctolagus cuniculus ocu-miR-432-3p mature miRNA
Sequence	48 - ACUGGAUGGCUCCUCCAUGUCU - 69
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344