Stem-loop ocu-mir-448

Accession

MI0039407

Description

Oryctolagus cuniculus ocu-mir-448 precursor miRNA

Sequence

GAACAUCCUGCAUAGUGCUGCCaagaaaucccuauuucauaccaagagggggcuggcuggUUGCAUAUGUAGGAUGUCCCA
..((((((((((((.(((.((((.(..(.((((..(((.......))))))).)..))))).)))))))))))))))....

Structure

--GA            G   U    a aa u    au   au 
    ACAUCCUGCAUA UGC GCCa g  a cccu  uuc  a
    |||||||||||| ||| |||| |  | ||||  |||  c
    UGUAGGAUGUAU ACG Uggu c  u gggg  gag  c
ACCC            -   U    - gg c    --   aa 

Annotation confidence Not enough data

Genome context

CM000811.1: 63272622-63272702 [+]

Mature ocu-miR-448-5p

• Accession: MIMAT0048451
• Description: Oryctolagus cuniculus ocu-miR-448-5p mature miRNA
• Sequence: 1 - GAACAUCCUGCAUAGUGCUGCC - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-448-3p

• Accession: MIMAT0048452
• Description: Oryctolagus cuniculus ocu-miR-448-3p mature miRNA
• Sequence: 61 - UUGCAUAUGUAGGAUGUCCCA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344