Stem-loop ocu-mir-449a

Accession

MI0039408

Description

Oryctolagus cuniculus ocu-mir-449a precursor miRNA

Sequence

UGGCAGUGUAUUGUUAGCUGGUugaauaugugugugauauCAGCUAACAUACAACUGCUAUC
(((((((((((.((((((((((...(((....)))...)))))))))))))).)))))))..

Structure

--       -    U          uga   u 
  UGGCAGU GUAU GUUAGCUGGU   aua g
  ||||||| |||| ||||||||||   |||  
  AUCGUCA CAUA CAAUCGACua   ugu u
CU       A    -          uag   g 

Annotation confidence Not enough data

Genome context

CM000800.1: 71142265-71142326 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-449a

Mature ocu-miR-449a-5p

• Accession: MIMAT0048453
• Description: Oryctolagus cuniculus ocu-miR-449a-5p mature miRNA
• Sequence: 1 - UGGCAGUGUAUUGUUAGCUGGU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-449a-3p

• Accession: MIMAT0048454
• Description: Oryctolagus cuniculus ocu-miR-449a-3p mature miRNA
• Sequence: 41 - CAGCUAACAUACAACUGCUAUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344