Stem-loop ocu-mir-449b

Accession

MI0039409

Description

Oryctolagus cuniculus ocu-mir-449b precursor miRNA

Sequence

AGGCAGUGUAAUGUUAGUUGGCUGCuuugggucaagucagcAGCCACAGGUACGCUGCCACU
.(((((((((.(((.....(((((((..((......))))))))))))..)))))))))...

Structure

--A         -A   UAGUU       uu  gu 
   GGCAGUGUA  UGU     GGCUGCu  gg  c
   |||||||||  |||     |||||||  ||   
   CCGUCGCAU  ACA     CCGAcga  cu  a
UCA         GG   -----       --  ga 

Annotation confidence Not enough data

Genome context

CM000800.1: 71142386-71142447 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-449b

Mature ocu-miR-449b-5p

• Accession: MIMAT0048455
• Description: Oryctolagus cuniculus ocu-miR-449b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAAUGUUAGUUGGCUGC - 25
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-449b-3p

• Accession: MIMAT0048456
• Description: Oryctolagus cuniculus ocu-miR-449b-3p mature miRNA
• Sequence: 42 - AGCCACAGGUACGCUGCCACU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344