Stem-loop ocu-mir-455

Accession

MI0039415

Description

Oryctolagus cuniculus ocu-mir-455 precursor miRNA

Literature search

23 open access papers mention ocu-mir-455
(71 sentences)

Sequence

431538 reads, 1093.0 reads per million, 36 experiments

UAUGUGCCUUUGGACUACAUCGUggaagccagcaccauGCAGUCCAUGGGCAUAUACA
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))..

Structure

--         U      A   C   gaa 
  UAUGUGCCU UGGACU CAU GUg   g
  ||||||||| |||||| ||| |||    
  AUAUACGGG ACCUGA Gua cac   c
AC         U      C   c   gac 

Annotation confidence High

Genome context

GL018699.1: 13398641-13398698 [-]

Mature ocu-miR-455-5p

• Accession: MIMAT0048465
• Description: Oryctolagus cuniculus ocu-miR-455-5p mature miRNA
• Sequence: 1 - UAUGUGCCUUUGGACUACAUCGU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-455-3p

• Accession: MIMAT0048466
• Description: Oryctolagus cuniculus ocu-miR-455-3p mature miRNA
• Sequence: 39 - GCAGUCCAUGGGCAUAUACA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344