Stem-loop ocu-mir-487a

Accession

MI0039418

Description

Oryctolagus cuniculus ocu-mir-487a precursor miRNA

Sequence

GUGGCUAUCCCUGCUGUGUUCGcuguauuugugacgAAUCAUACAGGGACAUCCAGUU
.(((...((((((.(((((((((.........).)))).))))))))))...)))...

Structure

--G   CUA      C    -    - ugu 
   UGG   UCCCUG UGUG UUCG c   a
   |||   |||||| |||| |||| |   u
   ACC   AGGGAC AUAC AAgc g   u
UUG   UAC      -    U    a ugu 

Annotation confidence Not enough data

Genome context

GL019048.1: 141248-141305 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from ocu-mir-487a

Mature ocu-miR-487a-5p

• Accession: MIMAT0048471
• Description: Oryctolagus cuniculus ocu-miR-487a-5p mature miRNA
• Sequence: 1 - GUGGCUAUCCCUGCUGUGUUCG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-487a-3p

• Accession: MIMAT0048472
• Description: Oryctolagus cuniculus ocu-miR-487a-3p mature miRNA
• Sequence: 37 - AAUCAUACAGGGACAUCCAGUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344