Stem-loop ocu-mir-489

Accession

MI0039421

Description

Oryctolagus cuniculus ocu-mir-489 precursor miRNA

Sequence

GGUCGUAUGUGUGGUGCCAUUCacuugaaccuuuagggGUGACAUCACAUAUACGGUGGC
..((((((((((((((.(((((.((.........))))))).))))))))))))))....

Structure

--GG              C     a  uga 
    UCGUAUGUGUGGUG CAUUC cu   a
    |||||||||||||| ||||| ||   c
    GGCAUAUACACUAC GUGgg ga   c
CGGU              A     -  uuu 

Annotation confidence Not enough data

Genome context

CM000799.1: 35345574-35345633 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-489

Mature ocu-miR-489-5p

• Accession: MIMAT0048477
• Description: Oryctolagus cuniculus ocu-miR-489-5p mature miRNA
• Sequence: 1 - GGUCGUAUGUGUGGUGCCAUUC - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-489-3p

• Accession: MIMAT0048478
• Description: Oryctolagus cuniculus ocu-miR-489-3p mature miRNA
• Sequence: 39 - GUGACAUCACAUAUACGGUGGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344