Stem-loop ocu-mir-496

Accession

MI0039425

Description

Oryctolagus cuniculus ocu-mir-496 precursor miRNA

Sequence

GGUUGUCCAUGGUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUC
(((((.(((((..(((((((((........)))))))))..))))).)))))..

Structure

--     U     GU         uua 
  GGUUG CCAUG  GUGUUCAUU   u
  ||||| |||||  |||||||||    
  CUAAC GGUAC  UAUGAGUag   u
CU     C     AU         uau 

Annotation confidence Not enough data

Genome context

GL019048.1: 149012-149065 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ocu-mir-496

Mature ocu-miR-496-5p

• Accession: MIMAT0048485
• Description: Oryctolagus cuniculus ocu-miR-496-5p mature miRNA
• Sequence: 1 - GGUUGUCCAUGGUGUGUUCAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-496-3p

• Accession: MIMAT0048486
• Description: Oryctolagus cuniculus ocu-miR-496-3p mature miRNA
• Sequence: 33 - UGAGUAUUACAUGGCCAAUCUC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344