miRBase entry: ocu-mir-497

Stem-loop ocu-mir-497

Accession

MI0039426

Description

Oryctolagus cuniculus ocu-mir-497 precursor miRNA

Sequence

CAGCAGCACACUGUGGUUUGUAcggcacuguggccacgucCAAACCACACUGUGGUGUUAGA
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))...

Structure

--C    G    C         U  --   ac 
   AGCA CACA UGUGGUUUG Ac  ggc  u
   |||| |||| ||||||||| ||  |||   
   UUGU GUGU ACACCAAAC ug  ccg  g
AGA    G    C         c  ca   gu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

CM000808.1: 12026199-12026260 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-497

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-497-5p

Accession	MIMAT0048487
Description	Oryctolagus cuniculus ocu-miR-497-5p mature miRNA
Sequence	1 - CAGCAGCACACUGUGGUUUGUA - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-497-3p

Accession	MIMAT0048488
Description	Oryctolagus cuniculus ocu-miR-497-3p mature miRNA
Sequence	41 - CAAACCACACUGUGGUGUUAGA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344