Stem-loop ocu-mir-506

Accession

MI0039435

Description

Oryctolagus cuniculus ocu-mir-506 precursor miRNA

Sequence

UACUCAGGAAGGCAUUAUUCAuguauuuugaugugugAAUGGUACACUUCUGAGUAGA
(((((((((..(.(((((((((((((....))))))))))))).)..)))))))))..

Structure

--         AG C             u 
  UACUCAGGA  G AUUAUUCAuguau u
  |||||||||  | |||||||||||||  
  AUGAGUCUU  C UGGUAAgugugua u
AG         CA A             g 

Annotation confidence Not enough data

Genome context

GL018700.1: 10694554-10694611 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-506

Mature ocu-miR-506-5p

• Accession: MIMAT0048505
• Description: Oryctolagus cuniculus ocu-miR-506-5p mature miRNA
• Sequence: 1 - UACUCAGGAAGGCAUUAUUCA - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-506-3p

• Accession: MIMAT0048506
• Description: Oryctolagus cuniculus ocu-miR-506-3p mature miRNA
• Sequence: 38 - AAUGGUACACUUCUGAGUAGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344