Stem-loop ocu-mir-545

Accession

MI0039446

Description

Oryctolagus cuniculus ocu-mir-545 precursor miRNA

Sequence

CCUCAGUAAAUGUUUAUUGGAUGaauaaaugagugacucaUCAACAAACAUUUAUUGCGUGCC
.(.((((((((((((....(((((.............)))))...)))))))))))).)....

Structure

---C U            AUUG     auaaa 
    C CAGUAAAUGUUU    GAUGa     u
    | ||||||||||||    |||||     g
    G GUUAUUUACAAA    CUacu     a
CCGU C            -CAA     cagug 

Annotation confidence Not enough data

Genome context

GL018757.1: 1527803-1527865 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-545

Mature ocu-miR-545-5p

• Accession: MIMAT0048527
• Description: Oryctolagus cuniculus ocu-miR-545-5p mature miRNA
• Sequence: 1 - CCUCAGUAAAUGUUUAUUGGAUG - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-545-3p

• Accession: MIMAT0048528
• Description: Oryctolagus cuniculus ocu-miR-545-3p mature miRNA
• Sequence: 41 - UCAACAAACAUUUAUUGCGUGCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344