Stem-loop ocu-mir-582

Accession

MI0039449

Description

Oryctolagus cuniculus ocu-mir-582 precursor miRNA

Literature search

10 open access papers mention ocu-mir-582
(14 sentences)

Sequence

52619 reads, 299.0 reads per million, 36 experiments

UUACAGUUGUUCAACCAGUUACUaaucuaacuaagugUAACCGGCUAAACAACUGAACCC
...((((((((...((.(((((..............))))).))...)))))))).....

Structure

--UUA        CAA  A     Uaaucu 
     CAGUUGUU   CC GUUAC      a
     ||||||||   || |||||       
     GUCAACAA   GG CAAUg      a
CCCAA        AUC  C     ugaauc 

Annotation confidence High

Genome context

CM000800.1: 75636026-75636085 [-]

Mature ocu-miR-582-5p

• Accession: MIMAT0048533
• Description: Oryctolagus cuniculus ocu-miR-582-5p mature miRNA
• Sequence: 1 - UUACAGUUGUUCAACCAGUUACU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-582-3p

• Accession: MIMAT0048534
• Description: Oryctolagus cuniculus ocu-miR-582-3p mature miRNA
• Sequence: 38 - UAACCGGCUAAACAACUGAACCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344