Stem-loop ocu-mir-652

Accession

MI0039453

Description

Oryctolagus cuniculus ocu-mir-652 precursor miRNA

Literature search

9 open access papers mention ocu-mir-652
(12 sentences)

Sequence

195414 reads, 632.0 reads per million, 36 experiments

ACAACCCUAGGAGAGGGUGCCAUUCacauagacuauaauugAAUGGCGCCACUAGGGUUGUGc
((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))..

Structure

--          GAGAG           ca  g 
  ACAACCCUAG     GGUGCCAUUCa  ua a
  ||||||||||     |||||||||||  || c
  UGUUGGGAUC     CCGCGGUAAgu  au u
cG          ----A           ua  a 

Annotation confidence High

Genome context

CM000811.1: 58478505-58478567 [+]

Mature ocu-miR-652-5p

• Accession: MIMAT0048541
• Description: Oryctolagus cuniculus ocu-miR-652-5p mature miRNA
• Sequence: 1 - ACAACCCUAGGAGAGGGUGCCAUUC - 25
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-652-3p

• Accession: MIMAT0048542
• Description: Oryctolagus cuniculus ocu-miR-652-3p mature miRNA
• Sequence: 42 - AAUGGCGCCACUAGGGUUGUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344