Stem-loop ocu-mir-653

Accession

MI0039454

Description

Oryctolagus cuniculus ocu-mir-653 precursor miRNA

Sequence

UUGAAACAUCCUCUAUUGAAUUaggcuuucaaccaagUUCACUGGAGUUUGUUUCAAUA
((((((((..(((((.((((((.((.......)).)))))).)))))..))))))))..

Structure

--        UC     U      a  cu 
  UUGAAACA  CUCUA UGAAUU gg  u
  ||||||||  ||||| |||||| ||  u
  AACUUUGU  GAGGU ACUUga cc  c
AU        UU     C      a  aa 

Annotation confidence Not enough data

Genome context

CM000799.1: 35346249-35346307 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ocu-mir-653

Mature ocu-miR-653-5p

• Accession: MIMAT0048543
• Description: Oryctolagus cuniculus ocu-miR-653-5p mature miRNA
• Sequence: 1 - UUGAAACAUCCUCUAUUGAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-653-3p

• Accession: MIMAT0048544
• Description: Oryctolagus cuniculus ocu-miR-653-3p mature miRNA
• Sequence: 38 - UUCACUGGAGUUUGUUUCAAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344