Stem-loop ocu-mir-656

Accession

MI0039457

Description

Oryctolagus cuniculus ocu-mir-656 precursor miRNA

Sequence

AGGUUGCCUGUGAGGUGUUCAcucucuauacgaugAAUAUUAUACAGUCAACCUCU
((((((.(((((.((((((((.((.......)))))))))).))))).))))))..

Structure

--      C     A        c  uc 
  AGGUUG CUGUG GGUGUUCA uc  u
  |||||| ||||| |||||||| ||  a
  UCCAAC GACAU UUAUAAgu ag  u
UC      U     A        -  ca 

Annotation confidence Not enough data

Genome context

GL019048.1: 153728-153783 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from ocu-mir-656

Mature ocu-miR-656-5p

• Accession: MIMAT0048549
• Description: Oryctolagus cuniculus ocu-miR-656-5p mature miRNA
• Sequence: 1 - AGGUUGCCUGUGAGGUGUUCA - 21
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-656-3p

• Accession: MIMAT0048550
• Description: Oryctolagus cuniculus ocu-miR-656-3p mature miRNA
• Sequence: 36 - AAUAUUAUACAGUCAACCUCU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344