Stem-loop ocu-mir-660

Accession

MI0039458

Description

Oryctolagus cuniculus ocu-mir-660 precursor miRNA

Sequence

UACCCAUUGCAUAUCGGAGUUGUaaauucucaaaacACCUCCUGUGUGCAUGGAUUGCA
...((((.((((((.((((.(((...........))).)))).))))))))))......

Structure

---UAC    U      C    U   aaau 
      CCAU GCAUAU GGAG UGU    u
      |||| |||||| |||| |||    c
      GGUA CGUGUG CCUC Aca    u
ACGUUA    -      U    C   aaac 

Annotation confidence Not enough data

Genome context

CM000811.1: 34242048-34242106 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ocu-mir-660

Mature ocu-miR-660-5p

• Accession: MIMAT0048551
• Description: Oryctolagus cuniculus ocu-miR-660-5p mature miRNA
• Sequence: 1 - UACCCAUUGCAUAUCGGAGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-660-3p

• Accession: MIMAT0048552
• Description: Oryctolagus cuniculus ocu-miR-660-3p mature miRNA
• Sequence: 37 - ACCUCCUGUGUGCAUGGAUUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344