miRBase entry: ocu-mir-758

Stem-loop ocu-mir-758

Accession

MI0039465

Description

Oryctolagus cuniculus ocu-mir-758 precursor miRNA

Sequence

AUGGUUGACCAGAGAGCACACGcuuuauuugugccgUUUGUGACCUGGUCCACUAACCCU
.((((.((((((.(.(((.((((.........).))).)))..))))))).)))).....

Structure

----A    U      A -A   C   - uuu 
     UGGU GACCAG G  GCA ACG c   a
     |||| |||||| |  ||| ||| |   u
     AUCA CUGGUC C  UGU Ugc g   u
UCCCA    C      - AG   U   c ugu

Annotation confidence Not enough data

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Genome context

GL019048.1: 125317-125376 [+]

Clustered miRNAs

12 other miRNAs are < 10 kb from ocu-mir-758

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-758-5p

Accession	MIMAT0048565
Description	Oryctolagus cuniculus ocu-miR-758-5p mature miRNA
Sequence	1 - AUGGUUGACCAGAGAGCACACG - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-758-3p

Accession	MIMAT0048566
Description	Oryctolagus cuniculus ocu-miR-758-3p mature miRNA
Sequence	37 - UUUGUGACCUGGUCCACUAACCCU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344