Stem-loop ocu-mir-874

Accession

MI0039470

Description

Oryctolagus cuniculus ocu-mir-874 precursor miRNA

Literature search

10 open access papers mention ocu-mir-874
(113 sentences)

Sequence

16848 reads, 99.0 reads per million, 36 experiments

CGGCCCCACGCACCAGGGUAAGagagacucuggcuucCUGCCCUGGCCCGAGGGACCGAC
(((.(((.((..((((((((.(.(((........))))))))))))..)).))).)))..

Structure

--   C   A  CA        A a   acu 
  CGG CCC CG  CCAGGGUA G gag   c
  ||| ||| ||  |||||||| | |||    
  GCC GGG GC  GGUCCCGU C cuu   u
CA   A   A  CC        - -   cgg 

Annotation confidence High

Genome context

CM000792.1: 19951768-19951827 [-]

Mature ocu-miR-874-5p

• Accession: MIMAT0048575
• Description: Oryctolagus cuniculus ocu-miR-874-5p mature miRNA
• Sequence: 1 - CGGCCCCACGCACCAGGGUAAG - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-874-3p

• Accession: MIMAT0048576
• Description: Oryctolagus cuniculus ocu-miR-874-3p mature miRNA
• Sequence: 38 - CUGCCCUGGCCCGAGGGACCGAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344