Stem-loop ocu-mir-885

Accession

MI0039472

Description

Oryctolagus cuniculus ocu-mir-885 precursor miRNA

Literature search

9 open access papers mention ocu-mir-885
(20 sentences)

Sequence

4094 reads, 63.0 reads per million, 25 experiments

UCCAUUACACUACCCUGCCUCUUcuccaugagAGGCAGCGGGGUGUAGUGGAUA
(((((((((((.(((((((((((......))))))))).)))))))))))))..

Structure

--           A  -         cu 
  UCCAUUACACU CC CUGCCUCUU  c
  ||||||||||| || |||||||||   
  AGGUGAUGUGG GG GACGGAgag  c
AU           -  C         ua 

Annotation confidence High

Genome context

GL019250.1: 60279-60332 [+]

Mature ocu-miR-885-5p

• Accession: MIMAT0048579
• Description: Oryctolagus cuniculus ocu-miR-885-5p mature miRNA
• Sequence: 1 - UCCAUUACACUACCCUGCCUCUU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-885-3p

• Accession: MIMAT0048580
• Description: Oryctolagus cuniculus ocu-miR-885-3p mature miRNA
• Sequence: 33 - AGGCAGCGGGGUGUAGUGGAUA - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344