Stem-loop ocu-mir-1249

Accession

MI0039475

Description

Oryctolagus cuniculus ocu-mir-1249 precursor miRNA

Literature search

1 open access papers mention ocu-mir-1249
(1 sentences)

Sequence

3293 reads, 19.0 reads per million, 34 experiments

AGGAGGGAGGAGAUGGGCCAAGUUCccucugccuggaACGCCCUUCCCCCCCUUCUUCA
(((((((.((.((.((((...(((((........))))))))).)).)))))))))...

Structure

---       A  A  U    CAA     cuc 
   AGGAGGG GG GA GGGC   GUUCc   u
   ||||||| || || ||||   |||||    
   UCUUCCC CC CU CCCG   CAagg   g
ACU       -  C  U    ---     ucc 

Annotation confidence High

Genome context

GL018962.1: 178972-179030 [+]

Mature ocu-miR-1249-5p

• Accession: MIMAT0048585
• Description: Oryctolagus cuniculus ocu-miR-1249-5p mature miRNA
• Sequence: 1 - AGGAGGGAGGAGAUGGGCCAAGUUC - 25
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-1249-3p

• Accession: MIMAT0048586
• Description: Oryctolagus cuniculus ocu-miR-1249-3p mature miRNA
• Sequence: 38 - ACGCCCUUCCCCCCCUUCUUCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344