Stem-loop ocu-mir-12093

Accession

MI0039495

Description

Oryctolagus cuniculus ocu-mir-12093 precursor miRNA

Sequence

AGAGCUACCUCUGGGACUGGUUucaaacucuucuagUCAGCCCCUGGGGUAGUUCUGA
(((((((((((.(((.((((((............)))))).))).)))))))))))..

Structure

--           U   A      ucaaa 
  AGAGCUACCUC GGG CUGGUU     c
  ||||||||||| ||| ||||||      
  UCUUGAUGGGG CCC GACUga     u
AG           U   C      ucuuc 

Annotation confidence Not enough data

Genome context

GL018731.1: 727960-728017 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-12093

Mature ocu-miR-12093-5p

• Accession: MIMAT0048625
• Description: Oryctolagus cuniculus ocu-miR-12093-5p mature miRNA
• Sequence: 1 - AGAGCUACCUCUGGGACUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-12093-3p

• Accession: MIMAT0048626
• Description: Oryctolagus cuniculus ocu-miR-12093-3p mature miRNA
• Sequence: 37 - UCAGCCCCUGGGGUAGUUCUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344