Stem-loop ocu-mir-105b

Accession

MI0039497

Description

Oryctolagus cuniculus ocu-mir-105b precursor miRNA

Sequence

UGAAAUGCUCAAACAUCAGUGGUaguuguucaugcacCAUGAUUGUCUGAGCAUAUGCC
....(((((((.(((...(((((.((.......)))))))...))).))))))).....

Structure

-UGAA       A   UCA     a  ug 
     AUGCUCA ACA   GUGGU gu  u
     ||||||| |||   ||||| ||  u
     UACGAGU UGU   UACca cg  c
CCGUA       C   UAG     -  ua 

Annotation confidence Not enough data

Genome context

GL018731.1: 388968-389026 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from ocu-mir-105b

Mature ocu-miR-105b-5p

• Accession: MIMAT0048629
• Description: Oryctolagus cuniculus ocu-miR-105b-5p mature miRNA
• Sequence: 1 - UGAAAUGCUCAAACAUCAGUGGU - 23
• Evidence: experimental ; Illumina [1]

Mature ocu-miR-105b-3p

• Accession: MIMAT0048630
• Description: Oryctolagus cuniculus ocu-miR-105b-3p mature miRNA
• Sequence: 38 - CAUGAUUGUCUGAGCAUAUGCC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344