Stem-loop cel-mir-12134

Accession

MI0039736

Description

Caenorhabditis elegans cel-mir-12134 precursor miRNA

Sequence

107 reads, 1.0 reads per million, 35 experiments

uuuuuucaagaaagUGGUCAACAGAAAAGUUGUAGAuaaagugauuaucUACAUCUUUUUAGUUGAUCACUuuuuugugagau
.((((.((((((((((((((((.((((((.(((((((((.....))))))))).)))))).)))))))))))))))).)))).

Structure

u    u                A      U         a 
 uuuu caagaaagUGGUCAAC GAAAAG UGUAGAuaa g
 |||| |||||||||||||||| |||||| ||||||||| u
 agag guuuuuUCACUAGUUG UUUUUC ACAUcuauu g
u    u                A      U         a 

Annotation confidence High

Genome context

chrV: 18317750-18317832 [-]

Mature cel-miR-12134-5p

• Accession: MIMAT0053614
• Description: Caenorhabditis elegans cel-miR-12134-5p mature miRNA
• Sequence: 15 - UGGUCAACAGAAAAGUUGUAGA - 36
• Evidence: experimental ; Illumina [1]

Mature cel-miR-12134-3p

• Accession: MIMAT0049028
• Description: Caenorhabditis elegans cel-miR-12134-3p mature miRNA
• Sequence: 50 - UACAUCUUUUUAGUUGAUCACU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28645154
   ALG-5 is a miRNA-associated Argonaute required for proper developmental timing in the Caenorhabditis elegans germline
   "Brown KC, Svendsen JM, Tucci RM, Montgomery BE, Montgomery TA"
   "Nucleic Acids Res (2017) 45:9093-9107