miRBase entry: ppa-mir-485

Stem-loop ppa-mir-485

Accession

MI0039745

Description

Pan paniscus ppa-mir-485 precursor miRNA

Sequence

AGAGGCUGGCCGUGAUGAAUUCgauucaucaaagcgagucauacacggcucuccucucu
(((((..(((((((((((.((((...........)))))))).)))))))..)))))..

Structure

--     CU       -    A    auuc 
  AGAGG  GGCCGUG AUGA UUCg    a
  |||||  ||||||| |||| ||||    u
  ucucc  ucggcac uacu gagc    c
uc     uc       a    -    gaaa

Annotation confidence Not enough data

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Genome context

chr14: 100989687-100989745 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppa-mir-485

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppa-miR-485

Accession	MIMAT0049037
Description	Pan paniscus ppa-miR-485 mature miRNA
Sequence	1 - AGAGGCUGGCCGUGAUGAAUUC - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596