miRBase entry: ppa-mir-889

Stem-loop ppa-mir-889

Accession

MI0039747

Description

Pan paniscus ppa-mir-889 precursor miRNA

Sequence

aauggcuguccguaguauggucucuauauuuaugaugaUUAAUAUCGGACAACCAUUGU
(((((.((((((..((.(((((((.........)).)))))))..)))))).)))))..

Structure

--     c      ua  a     -  uau 
  aaugg uguccg  gu ugguc uc   a
  ||||| ||||||  || ||||| ||   u
  UUACC ACAGGC  UA AUUag ag   u
UG     A      UA  -     u  uau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr14: 100982158-100982216 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ppa-mir-889

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppa-miR-889

Accession	MIMAT0049039
Description	Pan paniscus ppa-miR-889 mature miRNA
Sequence	39 - UUAAUAUCGGACAACCAUUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596