miRBase entry: mmr-mir-29b-1

Stem-loop mmr-mir-29b-1


Accession
MI0039842
Description
Microcebus murinus mmr-mir-29b-1 precursor miRNA


Sequence

1478 reads, 305.0 reads per million, 8 experiments
GCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUU
((((((((((.((((((..((((((.............)))))))))))).))))))))))...

Structure
---          U      GU      uuaaa 
   GCUGGUUUCA AUGGUG  UUAGAu     u
   |||||||||| ||||||  ||||||     a
   UGACUAAAGU UACCAC  GAUcug     g
UUG          U      --      uuagu 


Annotation confidence Not enough data
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Genome context
chr11: 20746458-20746521 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmr-mir-29b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-29b-1-5p

Accession MIMAT0060598
Description Microcebus murinus mmr-miR-29b-1-5p mature miRNA
Sequence 1 - GCUGGUUUCAUAUGGUGGUUUAGA - 24
Evidence experimental
Illumina [1]

Mature mmr-miR-29b-3p

Accession MIMAT0049130
Description Microcebus murinus mmr-miR-29b-3p mature miRNA
Sequence 42 - UAGCACCAUUUGAAAUCAGUGUU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596