miRBase entry: mmr-mir-29c

Stem-loop mmr-mir-29c


Accession
MI0039856
Description
Microcebus murinus mmr-mir-29c precursor miRNA


Sequence

1449 reads, 306.0 reads per million, 8 experiments
gACCGAUUUCUCCUGGUGUUCAGAgucuguuuuugucUAGCACCAUUUGAAAUCGGUUAu
((((((((((...(((((((.(((...........))))))))))...))))))))))..

Structure
--          UCC       C   gucu 
  gACCGAUUUC   UGGUGUU AGA    g
  ||||||||||   ||||||| |||    u
  UUGGCUAAAG   ACCACGA Ucu    u
uA          UUU       -   guuu 


Annotation confidence High
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Genome context
chr27: 31233101-31233160 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmr-mir-29c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-29c-5p

Accession MIMAT0060599
Description Microcebus murinus mmr-miR-29c-5p mature miRNA
Sequence 2 - ACCGAUUUCUCCUGGUGUUCAGA - 24
Evidence experimental
Illumina [1]

Mature mmr-miR-29c-3p

Accession MIMAT0049142
Description Microcebus murinus mmr-miR-29c-3p mature miRNA
Sequence 38 - UAGCACCAUUUGAAAUCGGUUA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596