Stem-loop mmr-mir-221

Accession

MI0039858

Description

Microcebus murinus mmr-mir-221 precursor miRNA

Literature search

1 open access papers mention mmr-mir-221
(1 sentences)

Sequence

2200 reads, 479.0 reads per million, 8 experiments

ACCUGGCACACAAUGUAGAUUUCUGUguuuguuaggcaacAGCUACAUUGUCUGCUGGGUUUC
((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))...

Structure

---        C         AUUU    -    g 
   ACCUGGCA ACAAUGUAG    CUGU guuu  
   |||||||| |||||||||    |||| |||| u
   UGGGUCGU UGUUACAUC    GAca cgga  
CUU        C         ----    a    u 

Annotation confidence High

Genome context

chrX: 135099142-135099204 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmr-mir-221

Mature mmr-miR-221-5p

• Accession: MIMAT0060600
• Description: Microcebus murinus mmr-miR-221-5p mature miRNA
• Sequence: 1 - ACCUGGCACACAAUGUAGAUUUCUGU - 26
• Evidence: experimental ; Illumina [1]

Mature mmr-miR-221-3p

• Accession: MIMAT0049144
• Description: Microcebus murinus mmr-miR-221-3p mature miRNA
• Sequence: 41 - AGCUACAUUGUCUGCUGGGUUUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596