miRBase entry: mmr-mir-18a

Stem-loop mmr-mir-18a


Accession
MI0039917
Description
Microcebus murinus mmr-mir-18a precursor miRNA


Sequence

54 reads, 13.0 reads per million, 8 experiments
UAAGGUGCAUCUAGUGCAGAUAGugaaguagauuagcaucuacugcccuaagugcuccuucugg
.((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).))))....

Structure
---U    U    C   U    A   -  aa u 
    AAGG GCAU UAG GCAG UAG ug  g a
    |||| |||| ||| |||| ||| ||  | g
    uucc cgug auc cguc auc ac  u a
gguc    u    a   c    -   u  ga u 


Annotation confidence Not enough data
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Genome context
chr13: 22000135-22000198 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from mmr-mir-18a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-18a-5p

Accession MIMAT0049197
Description Microcebus murinus mmr-miR-18a-5p mature miRNA
Sequence 1 - UAAGGUGCAUCUAGUGCAGAUAG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596