miRBase entry: mmr-let-7c-1

Stem-loop mmr-let-7c-1


Accession
MI0039921
Description
Microcebus murinus mmr-let-7c-1 precursor miRNA


Sequence

81885 reads, 17941.0 reads per million, 8 experiments
UGAGGUAGUAGGUUGUAUGGUUuagaguuacacccugggaguuaaCUGUACAACCUUCUAGCUUUCC
.(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))...

Structure
--U   G   U             ua  g ua  c 
   GAG UAG AGGUUGUAUGGUU  ga u  ca  
   ||| ||| |||||||||||||  || |  || c
   UUC AUC UCCAACAUGUCaa  uu a  gu  
CCU   G   U             --  g gg  c 


Annotation confidence High
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Genome context
chr31: 18655332-18655398 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmr-let-7c-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-let-7c-5p

Accession MIMAT0049201
Description Microcebus murinus mmr-let-7c-5p mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
Evidence experimental
Illumina [1]

Mature mmr-let-7c-3p

Accession MIMAT0060630
Description Microcebus murinus mmr-let-7c-3p mature miRNA
Sequence 46 - CUGUACAACCUUCUAGCUUUCC - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596