Stem-loop mmr-mir-214

Accession

MI0039934

Description

Microcebus murinus mmr-mir-214 precursor miRNA

Literature search

1 open access papers mention mmr-mir-214
(1 sentences)

Sequence

3029 reads, 669.0 reads per million, 8 experiments

UGCCUGUCUACACUUGCUGUGCAGAacauccgcucaccugUACAGCAGGCACAGACAGGCAGU
(((((((((...((((((((((((.............))))))))))))...)))))))))..

Structure

--         ACA            Aacau 
  UGCCUGUCU   CUUGCUGUGCAG     c
  |||||||||   ||||||||||||     c
  ACGGACAGA   GGACGACAUguc     g
UG         CAC            cacuc 

Annotation confidence High

Genome context

chr2: 133509786-133509848 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmr-mir-214

Mature mmr-miR-214-5p

• Accession: MIMAT0060640
• Description: Microcebus murinus mmr-miR-214-5p mature miRNA
• Sequence: 1 - UGCCUGUCUACACUUGCUGUGCAGA - 25
• Evidence: experimental ; Illumina [1]

Mature mmr-miR-214-3p

• Accession: MIMAT0049210
• Description: Microcebus murinus mmr-miR-214-3p mature miRNA
• Sequence: 41 - UACAGCAGGCACAGACAGGCAGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596