Stem-loop mmr-mir-27b

Accession

MI0039954

Description

Microcebus murinus mmr-mir-27b precursor miRNA

Literature search

1 open access papers mention mmr-mir-27b
(2 sentences)

Sequence

250203 reads, 52914.0 reads per million, 8 experiments

AGAGCUUAGCUGAUUGGUGAACAGugauugguuuccgcuuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))..

Structure

--           G    G       ugau   u 
  AGAGCUUAGCU AUUG UGAACAG    ugg  
  ||||||||||| |||| |||||||    ||| u
  UCUUGAAUCGG UGAC ACUUguu    gcc  
CG           -    -       --uc   u 

Annotation confidence High

Genome context

chr10: 10485875-10485937 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmr-mir-27b

Mature mmr-miR-27b-5p

• Accession: MIMAT0060650
• Description: Microcebus murinus mmr-miR-27b-5p mature miRNA
• Sequence: 1 - AGAGCUUAGCUGAUUGGUGAACAG - 24
• Evidence: experimental ; Illumina [1]

Mature mmr-miR-27b-3p

• Accession: MIMAT0049227
• Description: Microcebus murinus mmr-miR-27b-3p mature miRNA
• Sequence: 43 - UUCACAGUGGCUAAGUUCUGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596