miRBase entry: mmr-mir-23b

Stem-loop mmr-mir-23b


Accession
MI0039955
Description
Microcebus murinus mmr-mir-23b precursor miRNA


Sequence

101628 reads, 21962.0 reads per million, 8 experiments
UUGGGUUCCUGGCAUGCUGAUUugugacuuaagauuaaaAUCACAUUGCCAGGGAUUACC
...(((((((((((((.((((((..............)))))))).)))))))))))...

Structure
UUG           -  C      gugacu 
   GGUUCCUGGCA UG UGAUUu      u
   ||||||||||| || ||||||       
   UUAGGGACCGU AC ACUAaa      a
CCA           U  -      auuaga 


Annotation confidence High
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Genome context
chr10: 10485647-10485706 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mmr-mir-23b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmr-miR-23b-5p

Accession MIMAT0060651
Description Microcebus murinus mmr-miR-23b-5p mature miRNA
Sequence 1 - UUGGGUUCCUGGCAUGCUGAUU - 22
Evidence experimental
Illumina [1]

Mature mmr-miR-23b-3p

Accession MIMAT0049228
Description Microcebus murinus mmr-miR-23b-3p mature miRNA
Sequence 40 - AUCACAUUGCCAGGGAUUACC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596