miRBase entry: cja-mir-331

Stem-loop cja-mir-331


Accession
MI0040040
Description
Callithrix jacchus cja-mir-331 precursor miRNA


Sequence

10009 reads, 958.0 reads per million, 1 experiments
CUAGGUAUGGUCCCAGGGAUCCcagauuaaaccagGCCCCUGGGCCUAUCCUAGAAc
(((((.((((.(((((((...((...........)).))))))).)))))))))...

Structure
---     U    U       AUC  agau 
   CUAGG AUGG CCCAGGG   Cc    u
   ||||| |||| |||||||   ||    a
   GAUCC UAUC GGGUCCC   Gg    a
cAA     -    C       --C  acca 


Annotation confidence High
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Genome context
ref|NC_071450.1|: 94905696-94905752 [+]

Database links

Mature cja-miR-331-5p

Accession MIMAT0061596
Description Callithrix jacchus cja-miR-331-5p mature miRNA
Sequence 1 - CUAGGUAUGGUCCCAGGGAUCC - 22
Evidence experimental
Illumina [1]

Mature cja-miR-331-3p

Accession MIMAT0049304
Description Callithrix jacchus cja-miR-331-3p mature miRNA
Sequence 36 - GCCCCUGGGCCUAUCCUAGAA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596