Stem-loop cja-let-7e

Accession

MI0040048

Description

Callithrix jacchus cja-let-7e precursor miRNA

Literature search

1 open access papers mention cja-let-7e
(1 sentences)

Sequence

1226 reads, 117.0 reads per million, 1 experiments

UGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucacuauacgaccuccuagcuuucc
.(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))...

Structure

--U   G                U  -------  a g 
   GAG UAGGAGGUUGUAUAGU ga       gg g a
   ||| |||||||||||||||| ||       || |  
   uuc auccuccagcauauca cu       cc c c
ccu   g                -  agaggaa  - a 

Annotation confidence Not enough data

Genome context

ref|NC_071463.1|: 43741156-43741222 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-let-7e

Mature cja-let-7e-5p

• Accession: MIMAT0049312
• Description: Callithrix jacchus cja-let-7e-5p mature miRNA
• Sequence: 1 - UGAGGUAGGAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596