Stem-loop cja-let-7c-1

Accession

MI0040050

Description

Callithrix jacchus cja-let-7c-1 precursor miRNA

Literature search

1 open access papers mention cja-let-7c-1
(2 sentences)

Sequence

50905 reads, 4872.0 reads per million, 1 experiments

UGAGGUAGUAGGUUGUAUGGUUuagaguuacacccugggaguuaacuguacaaccuucuagcuuucc
.(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))...

Structure

--U   G   U             ua  g ua  c 
   GAG UAG AGGUUGUAUGGUU  ga u  ca  
   ||| ||| |||||||||||||  || |  || c
   uuc auc uccaacaugucaa  uu a  gu  
ccu   g   u             --  g gg  c 

Annotation confidence Not enough data

Genome context

ref|NC_071462.1|: 21793169-21793235 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cja-let-7c-1

Mature cja-let-7c-5p

• Accession: MIMAT0049314
• Description: Callithrix jacchus cja-let-7c-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUGGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596