miRBase entry: cja-mir-378

Stem-loop cja-mir-378


Accession
MI0040052
Description
Callithrix jacchus cja-mir-378 precursor miRNA


Sequence

7877 reads, 754.0 reads per million, 1 experiments
CUCCUGACUCCAGGUCCUGUGUguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGC
((.((((((((((((((.((((..(........)..)))).)))))))))))))).))..

Structure
--  C              U    gu acc 
  CU CUGACUCCAGGUCC GUGU  u   u
  || |||||||||||||| ||||  |    
  GA GACUGAGGUUCAGG CAcg  a   c
CG  A              U    au aag 


Annotation confidence High
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Genome context
ref|NC_071443.1|: 46506783-46506842 [+]

Database links

Mature cja-miR-378-5p

Accession MIMAT0061602
Description Callithrix jacchus cja-miR-378-5p mature miRNA
Sequence 1 - CUCCUGACUCCAGGUCCUGUGU - 22
Evidence experimental
Illumina [1]

Mature cja-miR-378-3p

Accession MIMAT0049316
Description Callithrix jacchus cja-miR-378-3p mature miRNA
Sequence 39 - ACUGGACUUGGAGUCAGAAGGC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596