miRBase entry: cja-mir-106b

Stem-loop cja-mir-106b

Accession

MI0040054

Description

Callithrix jacchus cja-mir-106b precursor miRNA

Sequence

UAAAGUGCUGACAGUGCAGAUagugguccucuccgugcuaccgcacuguggguacuugcug
..(((((((.(((((((.(.((((((......))..))))).))))))).)))))))....

Structure

--UA       G       A A    --  uc 
    AAGUGCU ACAGUGC G Uagu  gg  c
    ||||||| ||||||| | ||||  ||   
    uucaugg ugucacg c aucg  cc  u
gucg       g       c -    ug  uc

Annotation confidence Not enough data

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Genome context

chr2: 11814369-11814429 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-mir-106b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-106b

Accession	MIMAT0049318
Description	Callithrix jacchus cja-miR-106b mature miRNA
Sequence	1 - UAAAGUGCUGACAGUGCAGAU - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596