miRBase entry: cja-mir-1307

Stem-loop cja-mir-1307


Accession
MI0040057
Description
Callithrix jacchus cja-mir-1307 precursor miRNA


Sequence

1257 reads, 120.0 reads per million, 1 experiments
UCGACCGGACCUCGACCGGCUcgucucuguugccaaucgACUCGGCGUGGCGUCGGUCGU
.(((((((.((.((.((((.(((..............))).)))))).))..))))))).

Structure
U       -A  U  A    C   ucucug 
 CGACCGG  CC CG CCGG Ucg      u
 |||||||  || || |||| |||       
 GCUGGCU  GG GC GGCU Agc      u
U       GC  U  -    C   uaaccg 


Annotation confidence High
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Genome context
ref|NC_071453.1|: 93039968-93040027 [-]

Database links

Mature cja-miR-1307-5p

Accession MIMAT0049321
Description Callithrix jacchus cja-miR-1307-5p mature miRNA
Sequence 1 - UCGACCGGACCUCGACCGGCU - 21
Evidence experimental
Illumina [1]

Mature cja-miR-1307-3p

Accession MIMAT0061606
Description Callithrix jacchus cja-miR-1307-3p mature miRNA
Sequence 40 - ACUCGGCGUGGCGUCGGUCGU - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596