miRBase entry: cja-mir-100

Stem-loop cja-mir-100


Accession
MI0040058
Description
Callithrix jacchus cja-mir-100 precursor miRNA


Sequence

3 reads, 0.0 reads per million, 1 experiments
AACCCGUAGAUCCGAACUUGUGguguuaaugugcacaagcuugugucuauagguaug
.(((.((((((.(((.((((((...........)))))).))).)))))).)))...

Structure
--A   C      C   A      gugu 
   ACC GUAGAU CGA CUUGUG    u
   ||| |||||| ||| ||||||    a
   ugg uaucug guu gaacac    a
gua   a      u   c      gugu 


Annotation confidence Not enough data
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Genome context
ref|NC_071452.1|: 19553231-19553287 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cja-mir-100
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-100-5p

Accession MIMAT0049322
Description Callithrix jacchus cja-miR-100-5p mature miRNA
Sequence 1 - AACCCGUAGAUCCGAACUUGUG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596