miRBase entry: cja-mir-889

Stem-loop cja-mir-889

Accession

MI0040061

Description

Callithrix jacchus cja-mir-889 precursor miRNA

Sequence

aauggcuguccgugguauggucucucuauuuaugaugaUUAAUAUCGGACAACCAUUGU
(((((.((((((..((.(((((((.........)).)))))))..)))))).)))))..

Structure

--     c      ug  a     -  ucu 
  aaugg uguccg  gu ugguc uc   a
  ||||| ||||||  || ||||| ||   u
  UUACC ACAGGC  UA AUUag ag   u
UG     A      UA  -     u  uau

Annotation confidence Not enough data

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Genome context

chr10: 126965286-126965344 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cja-mir-889

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cja-miR-889

Accession	MIMAT0049325
Description	Callithrix jacchus cja-miR-889 mature miRNA
Sequence	39 - UUAAUAUCGGACAACCAUUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 28640911
Evolution of microRNA in primates
McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
PLoS One (2017) 12:e0176596