miRBase entry: cja-mir-889

Stem-loop cja-mir-889


Accession
MI0040061
Description
Callithrix jacchus cja-mir-889 precursor miRNA


Sequence


aauggcuguccgugguauggucucucuauuuaugaugaUUAAUAUCGGACAACCAUUGU
(((((.((((((..((.(((((((.........)).)))))))..)))))).)))))..

Structure
--     c      ug  a     -  ucu 
  aaugg uguccg  gu ugguc uc   a
  ||||| ||||||  || ||||| ||   u
  UUACC ACAGGC  UA AUUag ag   u
UG     A      UA  -     u  uau 


Annotation confidence Not enough data
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Genome context
ref|NC_071451.1|: 131862337-131862395 [+]
Clustered miRNAs
18 other miRNAs are < 10 kb from cja-mir-889
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cja-miR-889-3p

Accession MIMAT0049325
Description Callithrix jacchus cja-miR-889-3p mature miRNA
Sequence 39 - UUAAUAUCGGACAACCAUUGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596