Stem-loop cja-let-7f

Accession

MI0040064

Description

Callithrix jacchus cja-let-7f precursor miRNA

Literature search

1 open access papers mention cja-let-7f
(1 sentences)

Sequence

523286 reads, 50081.0 reads per million, 1 experiments

UGAGGUAGUAGAUUGUAUAGUUgugggguagugauuuuacccuguucaggagauaaCUAUACAAUCUAUUGCCU
..(((((((((((((((((((((((((((((.....))))))).........))))))))))))))))))))))

Structure

UG                      ---------       u 
  AGGUAGUAGAUUGUAUAGUUgu         gggguag g
  ||||||||||||||||||||||         ||||||| a
  UCCGUUAUCUAACAUAUCaaua         ucccauu u
--                      gaggacuug       u 

Annotation confidence High

Genome context

ref|NC_071442.1|: 71145974-71146047 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cja-let-7f

Mature cja-let-7f-5p

• Accession: MIMAT0049328
• Description: Callithrix jacchus cja-let-7f-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGAUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature cja-let-7f-3p

• Accession: MIMAT0061608
• Description: Callithrix jacchus cja-let-7f-3p mature miRNA
• Sequence: 57 - CUAUACAAUCUAUUGCCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 28640911
   Evolution of microRNA in primates
   McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
   PLoS One (2017) 12:e0176596