miRBase entry: cja-mir-101-2

Stem-loop cja-mir-101-2


Accession
MI0040067
Description
Callithrix jacchus cja-mir-101-2 precursor miRNA


Sequence

42538 reads, 4071.0 reads per million, 1 experiments
CGGUUAUCAUGGUACCGAUGCUguauaucugaaagGUACAGUACUGUGAUAACUGAA
(((((((((((((((.(.((((............))))).)))))))))))))))..

Structure
--               C A    guaua 
  CGGUUAUCAUGGUAC G UGCU     u
  ||||||||||||||| | ||||      
  GUCAAUAGUGUCAUG C AUGg     c
AA               A -    aaagu 


Annotation confidence High
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Genome context
ref|NC_071442.1|: 108313219-108313275 [+]

Database links

Mature cja-miR-101-2-5p

Accession MIMAT0061544
Description Callithrix jacchus cja-miR-101-2-5p mature miRNA
Sequence 1 - CGGUUAUCAUGGUACCGAUGCU - 22
Evidence experimental
Illumina [1-2]

Mature cja-miR-101-2-3p

Accession MIMAT0049331
Description Callithrix jacchus cja-miR-101-2-3p mature miRNA
Sequence 36 - GUACAGUACUGUGAUAACUGAA - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 28640911
    Evolution of microRNA in primates
    McCreight JC, Schneider SE, Wilburn DB, Swanson WJ
    PLoS One (2017) 12:e0176596