Stem-loop aof-MIR2275d

Accession

MI0040541

Description

Asparagus officinalis aof-MIR2275d precursor miRNA

Sequence

uuugaacuugAGAAUUAGAGGAUUGCAAACCaugaagaauuauuauuuucgguuugguuuccucuaauaucucacuuucauc
..((((..((((((((((((((...((((((..(((((.......)))))))))))...))))))))).)))))..))))..

Structure

uu    cu     -         UUG      au     au 
  ugaa  ugAGA AUUAGAGGA   CAAACC  gaaga  u
  ||||  ||||| |||||||||   ||||||  |||||  a
  acuu  acucu uaaucuccu   guuugg  cuuuu  u
cu    uc     a         uug      --     au 

Annotation confidence Not enough data

Genome context

chr6: 29242211-29242292 [+]

Mature aof-miR2275d

• Accession: MIMAT0049747
• Description: Asparagus officinalis aof-miR2275d mature miRNA
• Sequence: 11 - AGAAUUAGAGGAUUGCAAACC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29093472
   The asparagus genome sheds light on the origin and evolution of a young Y chromosome
   Harkess A, Zhou J, Xu C, Bowers JE, Van der Hulst R, Ayyampalayam S, Mercati F, Riccardi P, McKain MR, Kakrana A, Tang H, Ray J, Groenendijk J, Arikit S, Mathioni SM, Nakano M, Shan H, Telgmann-Rauber A, Kanno A, Yue Z, Chen H, Li W, Chen Y, Xu X, Zhang Y
   Nat Commun (2017) 8:1279