Stem-loop aof-MIR477b

Accession

MI0040552

Description

Asparagus officinalis aof-MIR477b precursor miRNA

Sequence

gcccuuugggAUCUCUCUCCCUCAAAGGCUCUcauacccagaugugaaaucugaguugaagccuugagggucagagauccuagaggccu
..((((((((((((((..(((((((.((((.(((.((.(((((.....))))).))))))))))))))))..))))))))))))))...

Structure

-gc              CU       A    C   u  c     g 
   ccuuugggAUCUCU  CCCUCAA GGCU Uca ac cagau u
   ||||||||||||||  ||||||| |||| ||| || ||||| g
   ggagauccuagaga  gggaguu ccga agu ug gucua a
ucc              cu       -    -   -  a     a 

Annotation confidence Not enough data

Genome context

chr2: 59746823-59746911 [+]

Mature aof-miR477b

• Accession: MIMAT0049758
• Description: Asparagus officinalis aof-miR477b mature miRNA
• Sequence: 11 - AUCUCUCUCCCUCAAAGGCUCU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29093472
   The asparagus genome sheds light on the origin and evolution of a young Y chromosome
   Harkess A, Zhou J, Xu C, Bowers JE, Van der Hulst R, Ayyampalayam S, Mercati F, Riccardi P, McKain MR, Kakrana A, Tang H, Ray J, Groenendijk J, Arikit S, Mathioni SM, Nakano M, Shan H, Telgmann-Rauber A, Kanno A, Yue Z, Chen H, Li W, Chen Y, Xu X, Zhang Y
   Nat Commun (2017) 8:1279