Stem-loop aof-MIR395a

Accession

MI0040595

Description

Asparagus officinalis aof-MIR395a precursor miRNA

Sequence

uguugcuuauccccgggaguucccucaaacacuuuguuauauaacucaaucucucugauacaagggagguaguauucuacUGAAGUGUUUGGGGGAACUCUggaugguaau
.((((((.((((...((((((((((((((((((((((...(((.((..((((((((......)))))))))))))...)).))))))))))))))))))))))))))))))

Structure

u      u    ccg                    -  uau   a  ca        ga 
 guugcu aucc   ggaguucccucaaacacuuu gu   aua cu  aucucucu  u
 |||||| ||||   |||||||||||||||||||| ||   ||| ||  ||||||||   
 uaaugg uagg   UCUCAAGGGGGUUUGUGAAG ca   uau ga  uggaggga  a
-      -    ---                    U  ucu   -  --        ac 

Annotation confidence Not enough data

Genome context

chr8: 417909-418019 [+]

Mature aof-miR395a

• Accession: MIMAT0049801
• Description: Asparagus officinalis aof-miR395a mature miRNA
• Sequence: 81 - UGAAGUGUUUGGGGGAACUCU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29093472
   The asparagus genome sheds light on the origin and evolution of a young Y chromosome
   Harkess A, Zhou J, Xu C, Bowers JE, Van der Hulst R, Ayyampalayam S, Mercati F, Riccardi P, McKain MR, Kakrana A, Tang H, Ray J, Groenendijk J, Arikit S, Mathioni SM, Nakano M, Shan H, Telgmann-Rauber A, Kanno A, Yue Z, Chen H, Li W, Chen Y, Xu X, Zhang Y
   Nat Commun (2017) 8:1279