miRBase entry: gga-mir-12220

Stem-loop gga-mir-12220


Accession
MI0040672
Description
Gallus gallus gga-mir-12220 precursor miRNA


Sequence

5 reads, 0 reads per million, 1 experiments
GUGCAGUGCUGGGGGGCACAGCGgggacguccuucccgucccaccgCUGAGCCCCGUUACCCUGCAGg
.(((((....(.(((((.(((((((((((.......)))))..)))))).))))).)....)))))..

Structure
-G     UGCU G     A      --     uc 
  UGCAG    G GGGGC CAGCGg  ggacg  c
  |||||    | ||||| ||||||  |||||  u
  ACGUC    U CCCCG GUCgcc  ccugc  u
gG     CCAU G     A      ac     cc 


Annotation confidence Not enough data
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Genome context
chr12: 2561662-2561729 [-]

Database links

Mature gga-miR-12220-5p

Accession MIMAT0049912
Description Gallus gallus gga-miR-12220-5p mature miRNA
Sequence 1 - GUGCAGUGCUGGGGGGCACAGCG - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12220-3p

Accession MIMAT0049913
Description Gallus gallus gga-miR-12220-3p mature miRNA
Sequence 47 - CUGAGCCCCGUUACCCUGCAG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973