Stem-loop mdo-mir-12346

Accession

MI0040859

Description

Monodelphis domestica mdo-mir-12346 precursor miRNA

Sequence

11 reads, 0 reads per million, 5 experiments

UGAGCCUUUCUCUCUUAGCUcccaguuaauguucacagcacggGAGGCCCAGAGGGAAGGCUUGAa
.(((((((((.((((..((((((.((...((....))..)))))).))..)))))))))))))...

Structure

--U         U    UA  -    a  uaa  u 
   GAGCCUUUC CUCU  GC Uccc gu   ug u
   ||||||||| ||||  || |||| ||   ||  
   UUCGGAAGG GAGA  CG AGgg ca   ac c
aAG         -    CC  G    -  -cg  a 

Annotation confidence Not enough data

Genome context

chr3: 514438608-514438673 [-]

Mature mdo-miR-12346-5p

• Accession: MIMAT0050233
• Description: Monodelphis domestica mdo-miR-12346-5p mature miRNA
• Sequence: 1 - UGAGCCUUUCUCUCUUAGCU - 20
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-12346-3p

• Accession: MIMAT0050234
• Description: Monodelphis domestica mdo-miR-12346-3p mature miRNA
• Sequence: 44 - GAGGCCCAGAGGGAAGGCUUGA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 29079676
   Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
   "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
   Genome Res (2017) 12:1961-1973